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DiPy development

Publications

[1] Garyfallidis E, Brett M, Nimmo-Smith I (2010), “Fast Dimensionality Reduction for Brain Tractography Clustering”, 16th Annual Meeting of the Organization for Human Brain Mapping.

[2] Garyfallidis E, Brett M, Tsiaras V, Vogiatzis G, Nimmo-Smith I (2010), “Identification of corresponding tracks in diffusion MRI tractographies” Proc. Intl. Soc. Mag. Reson. Med. 18

[3] Correia M.M, Williams G.B, Yeh F-C, Nimmo-Smith I, Garyfallidis E (2011), “Robustness of diffusion scalar metrics when estimated with Generalized Q-Sampling Imaging acquisition schemes”, Proc. Intl. Soc. Mag. Reson. Med. 19

[4] Chamberlain SR, Hampshire A, Menzies LA, Garyfallidis E, Grant JE, Odlaug BL, Craig K, Fineberg N, Sahakian BJ (2010), “Reduced brain white matter integrity in trichotillomania: a diffusion tensor imaging study.” Arch Gen Psychiatry 67(9):965-71

[5] Garyfallidis E, Brett M, Amirbekian B, Nguyen C, Yeh F-C, Olivetti E, Halchenko Y, Nimmo-Smith I “Dipy - a novel software library for diffusion MR and tractography”, 17th Annual Meeting of the Organization for Human Brain Mapping.

[6] Yeh F-C, Wedeen VJ, Tseng WY (2010), “Generalized Q-Sampling Imaging”, IEEE Trans. Med. Imaging.

[7] Garyfallidis E, Brett M, Correia M.M, Williams G.B, Nimmo-Smith I. (2012), “QuickBundles, a method for tractography simplification”, Frontiers in Neuroscience, 6 (175).

A note on citing our work

  • The main reference citation for Dipy is [5].
  • If you are using QuickBundles method please also cite [7].
  • If you are using track correspondence also cite [2].
  • If you are using Generalized Q-sampling please also cite [6].